Spies, M. Ashley : rechercher sur Z-Library

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1

An atomistic understanding of allosteric inhibition of glutamate racemase: a dampening of native activation dynamics

Spies, Michael Ashley, Witkin, Katie R., Vance, Nicholas R., Caldwell, Colleen, Li, Quinn, Yu, Liping

Journal:

Année:

2019

Fichier:

PDF, 2.14 MB

2019

2

Hybrid Steered Molecular Dynamics-Docking: An Efficient Solution to the Problem of Ranking Inhibitor Affinities Against a Flexible Drug Target.

Katie L. Whalen, Kevin M. Chang, M. Ashley Spies

Journal:

Molecular Informatics

Année:

2011

Langue:

english

Fichier:

PDF, 586 KB

english, 2011

3

Molecular Analyses of an Unusual Translesion DNA Polymerase from Methanosarcina acetivorans C2A

Li-Jung Lin, Aya Yoshinaga, Yuyen Lin, Claudia Guzman, Yi-Hsing Chen, Shou Mei, Angelica M. Lagunas, Satoshi Koike, Shigenori Iwai, M. Ashley Spies, Satish K. Nair, Roderick I. Mackie, Yoshizumi Ishin

Journal:

Journal of Molecular Biology

Année:

2010

Langue:

english

Fichier:

PDF, 2.32 MB

english, 2010

4

Nature of Allosteric Inhibition in Glutamate Racemase: Discovery and Characterization of a Cryptic Inhibitory Pocket Using Atomistic MD Simulations and p K a Calculations

Whalen, Katie L., Tussey, Kenneth B., Blanke, Steven R., Spies, M. Ashley

Journal:

Journal of Physical Chemistry B

Année:

2011

Langue:

english

Fichier:

PDF, 3.30 MB

english, 2011

5

Exploiting Enzyme Plasticity in Virtual Screening: High Efficiency Inhibitors of Glutamate Racemase

Whalen, Katie L., Pankow, Katherine L., Blanke, Steven R., Spies, M. Ashley

Journal:

ACS Medicinal Chemistry Letters

Année:

2010

Langue:

english

Fichier:

PDF, 2.72 MB

english, 2010

6

Nexus Between Protein–Ligand Affinity Rank-Ordering, Biophysical Approaches, and Drug Discovery

Spies, M. Ashley

Journal:

ACS Medicinal Chemistry Letters

Année:

2013

Langue:

english

Fichier:

PDF, 702 KB

english, 2013

7

Determinants of Catalytic Power and Ligand Binding in Glutamate Racemase

Spies, M. Ashley, Reese, Joseph G., Dodd, Dylan, Pankow, Katherine L., Blanke, Steven R., Baudry, Jerome

Journal:

Journal of the American Chemical Society

Année:

2009

Langue:

english

Fichier:

PDF, 1.75 MB

english, 2009

8

The Trapping of a Spontaneously “Flipped-Out” Base from Double Helical Nucleic Acids by Host−Guest Complexation with β-Cyclodextrin: The Intrinsic Base-Flipping Rate Constant for DNA and RNA

Spies, M. Ashley, Schowen, Richard L.

Journal:

Journal of the American Chemical Society

Année:

2002

Langue:

english

Fichier:

PDF, 111 KB

english, 2002

9

Flooding Enzymes: Quantifying the Contributions of Interstitial Water and Cavity Shape to Ligand Binding Using Extended Linear Response Free Energy Calculations

Whalen, Katie L., Spies, M. Ashley

Journal:

Journal of Chemical Information and Modeling

Année:

2013

Langue:

english

Fichier:

PDF, 3.15 MB

english, 2013

10

Kinetic Analysis of the 4-Methylideneimidazole-5-one-Containing Tyrosine Aminomutase in Enediyne Antitumor Antibiotic C-1027 Biosynthesis †

Christenson, Steven D., Wu, Weiming, Spies, M. Ashley, Shen, Ben, Toney, Michael D.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 270 KB

english, 2003

11

Trapping of a Dopaquinone Intermediate in the TPQ Cofactor Biogenesis in a Copper-Containing Amine Oxidase from Arthrobacter globiformis

Moore, Robyn H., Spies, M. Ashley, Culpepper, Matthew B., Murakawa, Takeshi, Hirota, Shun, Okajima, Toshihide, Tanizawa, Katsuyuki, Mure, Minae

Journal:

Journal of the American Chemical Society

Année:

2007

Langue:

english

Fichier:

PDF, 462 KB

english, 2007

12

Alanine Racemase Free Energy Profiles from Global Analyses of Progress Curves

Spies, M. Ashley, Woodward, Joshua J., Watnik, Mitchell R., Toney, Michael D.

Journal:

Journal of the American Chemical Society

Année:

2004

Langue:

english

Fichier:

PDF, 221 KB

english, 2004

13

Multi-scale Drivers of Spatial Variation in Old-Growth Forest Carbon Density Disentangled with Lidar and an Individual-Based Landscape Model

Rupert Seidl,Thomas A. Spies,Werner Rammer,E. Ashley Steel…

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2012

14

Multiple Hydrogen Kinetic Isotope Effects for Enzymes Catalyzing Exchange with Solvent: Application to Alanine Racemase

Spies, M. Ashley, Toney, Michael D.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 173 KB

english, 2003

15

Intrinsic Primary and Secondary Hydrogen Kinetic Isotope Effects for Alanine Racemase from Global Analysis of Progress Curves

Spies, M. Ashley, Toney, Michael D.

Journal:

Journal of the American Chemical Society

Année:

2007

Langue:

english

Fichier:

PDF, 180 KB

english, 2007

16

In silico Optimization of a Fragment-Based Hit Yields Biologically Active, High-Efficiency Inhibitors for Glutamate Racemase

Whalen, Katie L., Chau, Anthony C., Spies, M. Ashley

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.65 MB

english, 2013

17

Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA

Bae, Brian, Ohene-Adjei, Samuel, Kocherginskaya, Svetlana, Mackie, Roderick I., Spies, M. Ashley, Cann, Isaac K. O., Nair, Satish K.

Journal:

Journal of Biological Chemistry

Année:

2008

Langue:

english

Fichier:

PDF, 1.10 MB

english, 2008

18

Biosynthesis of a Novel Glutamate Racemase Containing a Site-Specific 7-Hydroxycoumarin Amino Acid: Enzyme–Ligand Promiscuity Revealed at the Atomistic Level

Dean, Sondra F., Whalen, Katie L., Spies, M. Ashley

Journal:

ACS Central Science

Année:

2015

Langue:

english

Fichier:

PDF, 7.92 MB

english, 2015

19

Complex mountain terrain and disturbance history drive variation in forest aboveground live carbon density in the western Oregon Cascades, USA

Zald, Harold S.J., Spies, Thomas A., Seidl, Rupert, Pabst, Robert J., Olsen, Keith A., Steel, E. Ashley

Journal:

Forest Ecology and Management

Année:

2016

Langue:

english

Fichier:

PDF, 2.92 MB

english, 2016

20

Multi-scale Drivers of Spatial Variation in Old-Growth Forest Carbon Density Disentangled with Lidar and an Individual-Based Landscape Model

Rupert Seidl, Thomas A. Spies, Werner Rammer, E. Ashley Steel, Robert J. Pabst and Keith Olsen

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 3.55 MB

english, 2012

21

Signals

Francis, Ashley, Spies, Brian, Malinvemo, Alberto, McMahon, Bob

Journal:

Année:

1996

Langue:

english

Fichier:

PDF, 307 KB

english, 1996

22

Allosteric Tuning of Caspase-7: a Fragment-Based Drug Discovery Approach

Vance, Nicholas Robert, Spies, Michael Ashley, Gakhar, Lokesh

Journal:

Angewandte Chemie

Année:

2017

Langue:

english

Fichier:

PDF, 1.24 MB

english, 2017

23

Small-Molecule Inhibitors Targeting DNA Repair and DNA Repair Deficiency in Research and Cancer Therapy

Hengel, Sarah R., Spies, M. Ashley, Spies, Maria

Journal:

Cell Chemical Biology

Année:

2017

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2017

24

Determinants of human Glucokinase activation and implications for small molecule allosteric control

Li, Quinn, Gakhar, Lokesh, Ashley Spies, M.

Journal:

Biochimica et Biophysica Acta (BBA) - General Subjects

Année:

2018

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2018

25

Elucidating the catalytic power of glutamate racemase by investigating a series of covalent inhibitors

Vance, Nicholas Robert, Witkin, Katie R., Rooney, Patrick W., Li, Yalan, Pope, Marshall, Spies, Michael Ashley

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 4.27 MB

english, 2018